cocomico.answer
CoCoMiCo Clingo answer objects.
Classes
An answer to a clingo query is a collection of terms in the stable model. |
Module Contents
- class cocomico.answer.Answer(scope_flat: all, exchange: all, polyopsonist: all, monopsonist: all, polypolist: all, monopolist: all, activated_flat: all, produced_seed_flat: all, consumed_seed_flat: all)[source]
An answer to a clingo query is a collection of terms in the stable model. The Answer object parses these terms into cocomico.base objects.
- Parameters:
scope (set[Biomolecule]) – community scope
exchange (dict[Biomolecule,Exchange]) – metabolic exchanges
polyopsonist (all) – exchanges with more than one consumer
monopsonist (all) – exchanges with exactly one consumer
activated (set[Reaction]) – activated reactions
produced_seeds (set[Biomolecule]) – seeds that are also produced
consumed_seeds (set[Biomolecule]) – seeds that are actually consumed
scope_flat (all)
polypolist (all)
monopolist (all)
activated_flat (all)
produced_seed_flat (all)
consumed_seed_flat (all)