Contents

• CoCoMiCo : COoperation and COmpetition in MIcrobial COmmunities
  • Install
  • Usage
  • Run using CWL
  • Output
  • Logging
  • Random sampling
• Version
• Using CoCoMiCo
  • Metabolites are biomolecules with provenance
  • Metabolic scope determined from seeds
  • Metabolic exchanges
  • Monopsonist, polyopsonist metabolites
  • Evaluating cooperation and competition potential
  • Evaluating added value
  • Identifying activated reactions
  • Seed consumption and production
• CoCoMiCo internals
  • Constructing models
  • Constructing communities
  • Knowledge base
• Contributing
  • Testing environment
  • Issues
  • Merge requests
  • Code quality
  • Versioing
• Authors
• API Reference
  • cocomico
  • sampling

Indexes and tables

• Index

• Module Index

• Search Page